Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951721.1_cds_XP_016491672.1_81962
CDS Infomation

[gene=LOC107811287] [db_xref=GeneID:107811287] [protein=two-component response regulator-like APRR7 isoform X3] [protein_id=XP_016491672.1] [location=complement(join(23420..23434,28201..28996,29123..29534,29623..29806,30390..30548,30820..30953,31061..31222,33567..33888))] [gbkey=CDS]
Sequence

ATGACTATAGTTGGTGATGAAGAAAGAGAAATGCCAGATGAGGACAAGGTTATTGGAGAT
GGGATTTCGCATGAGAGGCTAAATGTGGTTCAGGATAATAAGATTAACACTAATACAACC
AATAGTGATAGAATAGATGTGAGAGGGAACACATTGCAAGCTCAAGGTGGTTTGAAATTG
CAACAACAGCAACAGAGTCAAGGGTCGGTAGTCTGTTGGGAACAATTTCTTCATGTCACC
TCCATTAAAGTGCTTCTGGTGGAGAATGATGATTCTACACGACATGTCGTCTCTGCTTTA
CTTCGAAATTGCAATTATGAAGTTATAGAAGCAGCCAATGGATTGCAAGCTTGGAAGATA
CTGGAAAACCTGACCTATCATATTGATCTAGTGTTAACAGAGGTTGTAATGCCTTGTTTG
TCAGGCTTAGGCCTTCTATGCAAAATCATGAGCCACTACGCACACAAGACTATTCCTGTG
ATCATGATGTCATCTCACGATTCAATGGGTTTAGTCTTCAAGTGTTTGTCAAAAGGTGCA
GTTGACTTCCTGGTAAAACCTATACGGAAGAATGAGCTTAAGAACCTGTGGCAGCATGTG
TGGAGAAGATGCCACAGTTCTAGTGGAAGTGGGAGCGAAAGTGGTACTCAAACCCAAAAA
TCTATAAAATCAAAAAGCAAGAAGTCTGAAAACAACAGTGGTAGCAATGATGGGGAAGAT
AATGGGAGCGATGACCTAAATGTTGGAAACGGCAGTGATGATGGAAGTGGCACACAGAGT
TCCTGGACAAAGCAAGCTGTTGAAGTTGATAGCTCTCAGGCAGTACCTCCACGGAATCTG
TTACCTGAGTGTTCAGACAGCACTTGTGCACAGGTTCTTCATTCAAATGCAGAAACCGCT
GCTAACAGGAGTGCACACATAACCACCAAAAGAAAATGGCAAGTAGGAGAAGAAAAACCT
GATTACATTGCAAAGGGAAAACCCTCCCTCATAGGCATACCTAGAAATCAGAAGTCACAA
TCTGAAAATGCAATCCAGATTCCATCCAAACTTGTTGGGGCGAAACAGAACAGTCTGCTG
GAAATAGATTCCAATTCAAGCAGTTTTAAGATGGATAAATACCAGGCAAATCTAGATCGT
AATTGTCCATCCACTGAATATCATGATGTGACTGCTGAGACGTCTCATCATCGGAGTGAC
AGCAGAGAGTTGAACAAAGCTGTATTAGAAAGCAATAATGCATCCATTAATGAATCTAAA
CAGCCACTTCTTGAGCTAAGTTTGAAAAGGCTAAGAGGACCAAAAGAACCAGGGAAAACT
GCTCAAGATGATCGTAATGTTTTGAGAAGATCAGATCTTTCAGCTTTCTCAAGGTATAAT
TTGTCCTCAAACCCTATGACGACTCCTCATGGGATCACCCTAAGTAGTTCTTTAATTGAT
AATAGCCAAGAAGTTGCCAAGAAAGAGCCTGTATGTGATATTCCAACTCAGACAAATGAG
AAATTACAACATCCAACCTCAAATGGAACGGGCAATAATATAGATATGGGGTCCACCACT
AATAAACTTCCTAAGGAGCTATTACTTTCTATAGATAAGTCAGAAGCAACATCGACAATT
AACGATTTGCAACCATCGTCAGCTTTCAAGCCTGTAAAAATTGACTTCAGAATCTCTCCT
CAGCAAGGGCAACAAGTTAAGCCTTGTAACATGCAAGCCACAACCAGTCTTGCTCCGCAA
GGCTCTCACACTGACATCCTAATTCAGCAGCCTCATCAGCACCACCGAGATCATCATGTC
AACGACCTGGATCAGCGTTGCACTTCCAATCATGTTGATTGCTCATTGAAAAAACTGGCT
GTGGGTGGACGAAGTTGTGCTTCGTCCAATATTCTAACTAGGCCTTATGAAGGGAACCCT
GAATATCAGAGTTTGAACAGAAGTGCTTCTGGAAGTAACCGTGGAAGCAATGCGCAGGAT
GGAAGCTACACGGCTATAAATGCTGGAGGCACAAATGCAGAAAGTGATAATGGGTTAGCT
GGCAAAAATGGAAGTGGTGATGCCAGTGGCAGTGGTTGTGGAAGTACGATAGATCCTTCT
AAACTTACTAGAGCAGCAGCCTTGACCAAATTTCATTGGAAGAAGAAAGAAAGATGCTTT
AAAAAAAAGGGAAATGGACTGTAA

Peptide Sequence

PEP ID

XP_016491672.1
PEP Infomation

PREDICTED: two-component response regulator-like APRR7 isoform X3 [Nicotiana tabacum]
Sequence

MTIVGDEEREMPDEDKVIGDGISHERLNVVQDNKINTNTTNSDRIDVRGNTLQAQGGLKL
QQQQQSQGSVVCWEQFLHVTSIKVLLVENDDSTRHVVSALLRNCNYEVIEAANGLQAWKI
LENLTYHIDLVLTEVVMPCLSGLGLLCKIMSHYAHKTIPVIMMSSHDSMGLVFKCLSKGA
VDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSIKSKSKKSENNSGSNDGED
NGSDDLNVGNGSDDGSGTQSSWTKQAVEVDSSQAVPPRNLLPECSDSTCAQVLHSNAETA
ANRSAHITTKRKWQVGEEKPDYIAKGKPSLIGIPRNQKSQSENAIQIPSKLVGAKQNSLL
EIDSNSSSFKMDKYQANLDRNCPSTEYHDVTAETSHHRSDSRELNKAVLESNNASINESK
QPLLELSLKRLRGPKEPGKTAQDDRNVLRRSDLSAFSRYNLSSNPMTTPHGITLSSSLID
NSQEVAKKEPVCDIPTQTNEKLQHPTSNGTGNNIDMGSTTNKLPKELLLSIDKSEATSTI
NDLQPSSAFKPVKIDFRISPQQGQQVKPCNMQATTSLAPQGSHTDILIQQPHQHHRDHHV
NDLDQRCTSNHVDCSLKKLAVGGRSCASSNILTRPYEGNPEYQSLNRSASGSNRGSNAQD
GSYTAINAGGTNAESDNGLAGKNGSGDASGSGCGSTIDPSKLTRAAALTKFHWKKKERCF
KKKGNGL

Transcript Sequence

Gene sequence data has not been registered.